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EUKLID

EUKaryotic genome Labelling, Identification, and Display

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Welcome to EUKaryotic genome Labeling, Identification and Display

EUKLID (EUKaryotic genome Labeling, Identification and Display) is a freely available powerful web server for comprehensive eukaryotic genome annotation. It identifies all gene types (protein-coding, tRNA, rRNA, etc.) and the interactive genome viewer provides detailed, multi-resolution visualizations and clickable gene cards, while also supporting metabolome annotations and 3D protein structure visualizations. Annotations include structural, functional, and statistical data, with results available for download in JSON format.

If you use EUKLID for research please cite these sources:

BaSys2: Poelzer, J., Han, S., Saha, S., Oler, E., Kruger, R., Berjanskii, M., MacKay, S., Wishart, D.S. (2025) BASys2: A Next Generation Bacterial Genome Annotation System. Nucleic Acids Research. https://doi.org/10.1093/nar/gkaf360 (Preprint Available)

BASys: Van Domselaar, G.H., Stothard, P., Shrivastava, S., Cruz, J.A., Guo, A., Dong, X., Lu P., Szafron, D., Greiner, R. and Wishart, D.S. BASys: a web server for automated bacterial genome annotation. Nucleic Acids Research (Web Server Issue), https://doi.org/10.1093/nar/gki593